I have removed the fuel pump on my 2000 R* Project

. I have also put some Rhinehart Short staggard pipes with baffles on it

and it has a Baron's Big air kit

. I changed out the Needle Valve

and I have tried multiple
Main Jets anywhere from 167.5 up to 180 Makuni, and multiple
Pilot Jets (35, 37.5, and 40) I keep getting a backfire from the rear pipe

(actual flame coming from the rear exhaust)

on the bike stand from idle up to maybe 1/4 throttle and no amount of adjusting on the
PMS will make it completely go away. It will get better and worse, but never gone. I checked for leaks and as far as I can tell both the exhaust and the manifold are fine. I checked the plugs and the front look fine while the rear look rich. By the way, I'm in San Diego, so I'm pretty much at sea level.
So my next step (and I know it should have been my 1st step) was to check my float bowl setting. After reading multiple articles on the forum I thought I was going in pretty prepared, but the more I try to adjust it the more confused I get. The manual says to adjust it to 4 or 5mm above the float bowl mating surface, tech articles say anything from 1-2mm above to 1-2mm below the mating surface. Here comes my main question:
Which mating surface are we checking against? The manifold side is like 11 or 12mm higher than the air cleaner side.
When I started this little expedition my float bowl level was at 7mm above the mating surface on the air cleaner side. Should I be higher or lower than that? And I just gotta add that that little adjustment tang is one sensitive little bugger!
Thanks in advance for any suggestions.
Teal