Maessen,
Using the stock
carb with a big bore, high compression, open intake and exhaust, R* engine is like trying to mate an Arabian stallian with a mule. It can be done, but why bother? The mule can't keep up, the stallion will get frustrated, and the outcome will be ugly, at best.
What I mean is, the stock CV (constant velocity) carb doesn't flow well enough for the stock engine (in my opinion). It was designed for snowmobiles, as I understand, not specifically for an application like the R*.
I'm sorry I won't be more specific help, but I feel it would be no end of trouble for you to try and get enough gas/air into your engine for it to run like it could, with that stock carb. I'm sure someone out there will disagree with me. More power to them.
I love my Mikuni
HSR-42. I kick myself for not getting rid of the stock carb earlier. I fought my stocker for about 2 years. Dialed the HSR42 right in without any trouble at all.
Hope this helps. Sorry, man. I really don't often tell people that I think they're making a mistake.